Publications from the OCTOPUS facility
2026
2025
2024
M Stitch, R Sanders, IV Sazanovich, M Towrie, SW Botchway, SJ Quinn
Opt. Lett. 49, 2621-2624 (2024), https://doi.org/10.1364/OL.514964
2023
2022
| Structure and activity of particulate methane monooxygenase arrays in methanotrophs Yanan Zhu, Christopher W. Koo, C. Keith Cassidy, Matthew C. Spink, Tao Ni, Laura C. Zanetti-Domingues, Benji Bateman, Marisa L. Martin-Fernandez, Juan Shen, Yuewen Sheng, Yun Song, Zhengyi Yang, Amy C. Rosenzweig & Peijun Zhang Nat. Commun., 13, 5221 (2022). https://doi.org/10.1038/s41467-022-32752-9 |
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| Myosin VI regulates the spatial organisation of mammalian transcription initiation. Yukti Hari-Gupta, Natalia Fili, Ália dos Santos, Alexander W. Cook, Rosemarie E. Gough, Hannah C. W. Reed, Lin Wang, Jesse Aaron, Tomas Venit, Eric Wait, Andreas Grosse-Berkenbusch, J. Christof M. Gebhardt, Piergiorgio Percipalle, Teng-Leong Chew, Marisa Martin-Fernandez & Christopher P. Toseland Nature Communications, 2022. 13(1): p. 1346. DOI: https://doi.org/10.1038/s41467-022-28962-w |
| Measuring Nuclear Organization of Proteins with STORM Imaging and Cluster Analysis, in Chromosome Architecture: Methods and Protocols Ália dos Santos, Rosemarie E. Gough, Lin Wang & Christopher P. Toseland Springer US: New York, NY. p. 293-309, DOI: 10.1007/978-1-0716-2221-6_20 |
| Binding partners regulate unfolding of myosin VI to activate the molecular motor Dos Santos Á, Fili N, Hari-Gupta Y, Gough RE, Wang L, Martin-Fernandez M, Aaron J, Wait E, Chew TL, Toseland CP Biochemical Journal, 479.13 (2022): 1409-1428. DOI: 10.1042/BCJ20220025 |
| Time-resolved infra-red studies of photo-excited porphyrins in the presence of nucleic acids and in HeLa tumour cells: insights into binding site and electron transfer dynamics PM Keane, C Zehe, FE Poynton, SA Bright, S Estayalo-Adrián, SJ Devereux, PM Donaldson, IV Sazanovich, M Towrie, SW Botchway, CJ Cardin, DC Williams, T Gunnlaugsson, C Long, JM Kelly, SJ Quinn Physical Chemistry Chemical Physics, PCCP, 08 Nov 2022, DOI: 10.1039/d2cp04604k PMID: 36345709 |
| Methods for Detection of Protein Interactions with Plasmodesmata-Localized Reticulons Kriechbaumer, V., Botchway, S.W. Plasmodesmata. Methods in Molecular Biology, vol 2457. Humana, New York, NY. DOI: https://doi.org/10.1007/978-1-0716-2132-5_13 |
| SARS-CoV-2 and EBV; the cost of a second mitochondrial “whammy”? Nunn, A.V., Guy, G.W., Botchway, S.W. et al. Immun. Ageing 18, 40 (2021). DOI: https://doi.org/10.1186/s12979-021-00252-x |
| The guidance and adhesion protein FLRT2 dimerizes in cis via dual small-X3-small transmembrane motifs Verity Jackson, Julia Hermann, Christopher J. Tynan, Daniel J. Rolfe, Robin A. Corey, Anna L. Duncan, Maxime Noriega, Amy Chu, Antreas C. Kalli, E. Yvonne Jones, Mark S.P. Sansom, Marisa L. Martin-Fernandez, Elena Seiradake, Matthieu Chavent Structure, Volume 30, Issue 9, 2022, Pages 1354-1365.e5, ISSN 0969-2126, DOI: https://doi.org/10.1016/j.str.2022.05.014 |
| Resolving the Effect of Oxygen Vacancies on Co Nanostructures Using Soft XAS/X-PEEM Chengwu Qiu, Yaroslav Odarchenko, Qingwei Meng, Shaojun Xu, Ines Lezcano-Gonzalez, Paul Olalde-Velasco, Francesco Maccherozzi, Laura Zanetti-Domingues, Marisa Martin-Fernandez, and Andrew M. Beale ACS Catalysis 2022 12 (15), 9125-9134 DOI: 10.1021/acscatal.2c00611 |
| AR cooperates with SMAD4 to maintain skeletal muscle homeostasis Forouhan M, Lim WF, Zanetti-Domingues LC, Tynan CJ, Roberts TC, Malik B, Manzano R, Speciale AA, Ellerington R, Garcia-Guerra A, Fratta P, Sorarú G, Greensmith L, Pennuto M, Wood MJA, Rinaldi C. Acta Neuropathol. 2022 Jun;143(6):713-731. doi: 10.1007/s00401-022-02428-1. Epub 2022 May 6. PMID: 35522298; PMCID: PMC9107400. |
| Instantaneous 4D micro‑particle image velocimetry (µPIV) via multifocal microscopy (MUM) M. G. R. Guastamacchia, R. Xue, K. Madi, W. T. E. Pitkeathly, P. D. Lee, S. E. D. Webb, S. H. Cartmell & P. A. Dalgarno Scientific Reports (2022) 12:18458 DOI: https://doi.org/10.1038/s41598-022-22701-3 |
| A perspective of fluorescence microscopy for cellular structural biology with EGFR as witness. Martin-Fernandez, M. L. Journal of Microscopy, 00, 1– 19. https://doi.org/10.1111/jmi.13151 |
| FRET-FLIM to Determine Protein Interactions and Membrane Topology of Enzyme Complexes Spatola Rossi, T., Pain, C., Botchway, S. W., & Kriechbaumer, V. Current Protocols, 2, e598. DOI: https://doi.org/10.1002/cpz1.598 |
| Inhibits CXCR4 Dynamics and CXCL12-Mediated Directed Cell Migration in Human T Cells. Gardeta SR, Garc´ıa-Cuesta EM, D’Agostino G, Soler Palacios B, Quijada-Freire A, Lucas P, Bernardino de la Serna J, Gonzalez-Riano C, Barbas C, Rodr´ıguez-Frade JM and Mellado M. Front. Immunol. 13:925559. doi: 10.3389/fimmu.2022.925559 |
| Identification of a New Cholesterol-Binding Site within the IFN-γ Receptor that is Required for Signal Transduction Morana, O., Nieto-Garai, J. A., Björkholm, P., Bernardino de la, J., Terrones, O., Arboleya, A., Ciceri, D., Rojo-Bartolomé, I., Blouin, C. M., Lamaze, C., Lorizate, M., Contreras, F.-X., Adv. Sci. 2022, 9, 2105170. https://doi.org/10.1002/advs.202105170 |
| In Situ Sol–Gel Synthesis of Unique Silica Structures Using Airborne Assembly: Implications for In-Air Reactive Manufacturing Connor R. Barker, Francesca K. Lewns, Gowsihan Poologasundarampillai, and Andrew D. Ward ACS Appl. Nano Mater. 2022, 5, 8, 11699–11706, DOI: https://doi.org/10.1021/acsanm.2c02683 |
| The impact of molecular self-organisation on the atmospheric fate of a cooking aerosol proxy Adam Milsom, Adam M. Squires, Andrew D. Ward, and Christian Pfrang Atmos. Chem. Phys., 22, 4895–4907, 2022 DOI: https://doi.org/10.5194/acp-22-4895-2022 |
| Mie scattering from optically levitated mixed sulfuric acid–silica core–shell aerosols: observation of core–shell morphology for atmospheric science Megan R. McGrory, Rosalie H. Shepherd, Martin D. King, Nicholas Davidson, Francis D. Pope, I. Matthew Watson, Roy G. Grainger, Anthony C. Jones and Andrew D. Ward Phys. Chem. Chem. Phys., 2022,24, 5813-5822, DOI: https://doi.org/10.1039/D1CP04068E |
| Measurement of gas-phase OH radical oxidation and film thickness of organic films at the air–water interface using material extracted from urban, remote and wood smoke aerosol Rosalie H. Shepherd, Martin D. King, Adrian R. Rennie, Andrew D. Ward, Markus M. Frey, Neil Brough, Joshua Eveson, Sabino Del Vento, Adam Milsom, Christian Pfrang, Maximilian W. A. Skoda and Rebecca J. L. Welbourn Environ. Sci.: Atmos., 2022,2, 574-590, DOI: https://doi.org/10.1039/D2EA00013J |
2021
| Correlative multi-scale cryo-imaging unveils SARS-CoV-2 assembly and egress Luiza Mendonça, Andrew Howe, James B. Gilchrist, Yuewen Sheng, Dapeng Sun, Michael L. Knight, Laura C. Zanetti-Domingues, Benji Bateman, Anna-Sophia Krebs, Long Chen, Julika Radecke, Vivian D. Li, Tao Ni, Ilias Kounatidis, Mohamed A. Koronfel, Marta Szynkiewicz, Maria Harkiolaki, Marisa L. Martin-Fernandez, William James & Peijun Zhang Nature Communications volume 12, Article number: 4629 (2021);DOI: https://doi.org/10.1038/s42003-020-0872-x |
| A Dinuclear Osmium(II) Complex Near-Infrared Nanoscopy Probe for Nuclear DNA Fabian Dröge, Felicity F. Noakes, Stuart A. Archer, Sreejesh Sreedharan, Ahtasham Raza, Craig C. Robertson, Sheila MacNeil, John W. Haycock, Heather Carson, Anthony J. H. M. Meijer, Carl G. W. Smythe, Jorge Bernardino de la Serna, Benjamin Dietzek-Ivanšić, and Jim A. Thomas Journal of the American Chemical Society 2021 143 (48), 20442-20453 DOI: 10.1021/jacs.1c10325 |
| Miro2 tethers the ER to mitochondria to promote mitochondrial fusion in tobacco leaf epiderma Rhiannon R. White, Congping Lin, Ian Leaves, Inês G. Castro, Jeremy Metz, Benji C. Bateman, Stanley W. Botchway, Andrew D. Ward, Peter Ashwin & Imogen Sparkes Communications Biology volume 3, Article number: 161 (2020); DOI: https://doi.org/10.1038/s42003-020-0872-x |
| The persistence of a proxy for cooking emissions in megacities: a kinetic study of the ozonolysis of self-assembled films by simultaneous small and wide angle X-ray scattering (SAXS/WAXS) and Raman microscopy Adam Milsom, Adam M. Squires, Ben Woden, Nicholas J. Terrill, Andrew D. Ward and Christian Pfrang Faraday discussions; DOI: https://doi.org/10.1039/D0FD00088D |
| Super-Resolution Microscopy Using a Bioorthogonal-Based Cholesterol Probe Provides Unprecedented Capabilities for Imaging Nanoscale Lipid Heterogeneity in Living Cells Maier Lorizate, Oihana Terrones, Jon Ander Nieto-Garai, Iratxe Rojo-Bartolomé, Dalila Ciceri, Ornella Morana, June Olazar-Intxausti, Aroa Arboleya, Alexia Martin, Marta Szynkiewicz, Maria Calleja-Felipe, Jorge Bernardino de la Serna and F.-Xabier Contreras Small Methods; DOI: https://doi.org/10.1002/smtd.202100430 |
| Multi-dimensional and spatiotemporal correlative imaging at the plasma membrane of live cells to determine the continuum nano-to-micro scale lipid adaptation and collective motion Miguel Bernabé-Rubioab, Minerva Bosch-Forteaac, Miguel A. Alonsoa, Jorge Bernardino de la Serna Methods; DOI: https://doi.org/10.1016/j.ymeth.2021.06.007 |
| Adaptive Lipid Immiscibility and Membrane Remodeling Are Active Functional Determinants of Primary Ciliogenesis Miguel Bernabé-Rubio, Minerva Bosch-Fortea, Esther García, Jorge Bernardino de la Serna, Miguel A. Alonso Small Methods; DOI: https://doi.org/10.1002/smtd.202000711 |
| Real-time imaging and analysis of cell-hydrogel interplay within an extrusion-bioprinting capillary Gowsihan Poologasundarampillai, Abdelrahman Haweet, Soher Nagi Jayash, George Morgan, James E. Moore Jr, Alessia Candeo Bioprinting, Volume 23, 12 April 2021; DOI: https://doi.org/10.1016/j.bprint.2021.e00144 |
| Combining Multicolor FISH with Fluorescence Lifetime Imaging for Chromosomal Identification and Chromosomal Sub Structure Investigation Archana Bhartiya, Ian Robinson, Mohammed Yusuf and Stanley W. Botchway Frontiers in Molecular Biosciences 8, 85, 2021; DOI: https://doi.org/10.3389/fmolb.2021.631774 |
| Structural Investigations, Cellular Imaging, and Radiolabeling of Neutral, Polycationic, and Polyanionic Functional Metalloporphyrin Conjugates Valeria Ciaffaglione, Philip A. Waghorn, Rüdiger M. Exner, Fernando Cortezon-Tamarit, Samuel P. Godfrey, Sophia Sarpaki, Helena Quilter, Ruggero Dondi, Haobo Ge, Gabriele Kociok-Kohn, Stanley W. Botchway, Ian M. Eggleston, Jonathan R. Dilworth, and Sofia I. Pascu Bioconjugate Chemistry 2021; DOI: https://doi.org/10.1021/acs.bioconjchem.0c00691 |
| Multicolor FRET-FLIM Microscopy to Analyze Multiprotein Interactions in Live Cells Ahmed A., Schoberer J., Cooke E., Botchway S.W. Multiprotein Complexes, Methods in Molecular Biology, vol 2247. Humana, New York, NY; DOI: https://doi.org/10.1007/978-1-0716-1126-5_16 |
| Singlet Exciton Fission and Associated Enthalpy Changes with a Covalently Linked Bichromophore Comprising TIPS-Pentacenes Held in an Open Conformation Joshua K. G. Karlsson, Alparslan Atahan, Anthony Harriman, Nikolai V. Tkachenko, Andrew D. Ward, Fabio A. Schaberle, Carlos Serpa and Luis G. Arnaut J. Phys. Chem. A. 2021, 125, 5, 1184–1197; DOI: https://doi.org/10.1021/acs.jpca.0c09961 |
| A Targeted and Tuneable DNA Damage Tool Using CRISPR/Cas9 Ioannis Emmanouilidis, Natalia Fili, Alexander W. Cook, Yukti Hari-Gupta, Ália dos Santos, Lin Wang, Marisa L. Martin-Fernandez, Peter J. I. Ellis and Christopher P. Toseland Biomolecules 2021, 11(2), 288; DOI: https://doi.org/10.3390/biom11020288 |
| Serial cryoFIB/SEM Reveals Cytoarchitectural Disruptions in Leigh Syndrome Patient Cells Yanan Zhu, Dapeng Sun, Andreas Schertel, Jiying Ning, Xiaofeng Fu, Pam Pam Gwo, Alan M Watson, Laura C Zanetti-Domingues, Marisa L Martin-Fernandez, Zachary Freyberg, Peijun Zhang Structure Volume 29, Issue 1, 7 January 2021; DOI: 10.1016/j.str.2020.10.003 |
2020
Phys. Chem. Chem. Phys., 2020,22, 28032-28044DOI https://doi.org/10.1039/D0CP03934A
SARS-CoV-2 and mitochondrial health: implications of lifestyle and ageing
Alistair V. W. Nunn, Geoffrey W. Guy, Wolfgang Brysch, Stanley W. Botchway, Wayne Frasch, Edward J. Calabrese & Jimmy D. Bell
Immunity & Ageing 17, 33 (2020). https://doi.org/10.1186/s12979-020-00204-x
Journal of Photochemistry and Photobiology B: Biology, Volume 213, December 2020, 112055; https://doi.org/10.1016/j.jphotobiol.2020.112055
The smfBox is an open-source platform for single-molecule FRET
Nature Communications volume 11, Article number: 5641 (2020); https://doi.org/10.1038/s41467-020-19468-4
Journal of Microscopy, Vol. 00, Issue 0 2020, pp. 1–13 DOI: 10.1111/jmi.12974
Biology 2020, 9(10), 344; https://doi.org/10.3390/biology9100344
Royal Society of Chemistry, Faraday Discuss. (2020), DOI: 10.1039/D0FD00088D
Chem. Sci., 2020, 11, 8828-8838; DOI: 10.1039/D0SC03410J
Journal of Extracellular Vesicles 9 (1), 1759926; https://doi.org/10.1080/20013078.2020.1759926
Biochem J (2020) BCJ20200496, https://doi.org/10.1042/BCJ20200496
Communications Biology volume 3, Article number: 161 (2020) DOI: s42003-020-0872-x
Faseb J. (2020) DOI: 10.1096/fj.201701473RR
J. Am. Chem. Soc. (2020) DOI: 142, 2, 1101-1111
Chemical Science, Issue 1 2020 https://doi.org/10.1039/C9SC04710G
2019
Ge H, Cortezon-Tamarit F, Wang HC, Sedgwick AC, Arrowsmith RL, Mirabello V, Botchway SW, James TD, Pascu SI.
Graham AD, Pandey R, Tsancheva VS, Candeo A, Botchway SW, Allan AJ, Teboul L, Madi K, Babra TS, Zolkiewski LAK, Xue X, Bentley L, Gannon J, Olof SN, Cox RD.
Kirsty L. Smitten, Hannah M. Southam, Jorge Bernardino de la Serna, Martin R. Gill, Paul J. Jarman, Carl G. W. Smythe, Robert K. Poole, Jim A. Thomas
ACS Nano 2019, 13, 5, 5133-5146
Super-Resolution Microscopy Reveals Shape and Distribution of Dislocations in Single-Crystal Nanocomposites
Johannes Ihli, David C. Green, Christophe Lynch, Mark A. Holden, Phillip A. Lee, Shuheng Zhang, Ian K. Robinson, Stephen E. D. Webb, and Fiona C. Meldrum
Angew. Chem. Int. Ed. 2019, 58, 17328–17334 DOI: 10.1002/anie.201905293.
Super-resolution Microscopy at Cryogenic Temperatures Using Solid Immersion Lenses
Bateman, B. C., Zanetti-Domingues, L. C., Moores, A. N., Needham, S. R., Rolfe, D. J., Wang, L., Clarke, D. T. and Martin-Fernandez, M. L.
Bio-protocol 9(22): e3426. DOI: 10.21769/BioProtoc.3426. November 2019
A global sampler of single particle tracking solutions for single molecule microscopy
Michael Hirsch, Richard Wareham, Ji W. Yoon, Daniel J. Rolfe , Laura C. Zanetti-Domingues, Michael P. Hobson, Peter J. Parker, Marisa L. Martin-Fernandez, Sumeetpal S. Singh
PLOS ONE, https://doi.org/10.1371/journal.pone.0221865, October 2019
A highly dynamic F-actin network regulates transport and recycling of micronemes in Toxoplasma gondii vacuoles
Javier Periz, Mario Del Rosario, Alexandra McStea, Simon Gras, Colin Loney, Lin Wang, Marisa L. Martin-Fernandez & Markus Meissner
Nature Communications 10(1), DOI: 10.1038/s41467-019-12136-2
The cell wall regulates dynamics and size of plasma-membrane nanodomains in Arabidopsis
J. F. McKenna, D. J. Rolfe, S. E. D. Webb, A. F. Tolmie, S. W. Botchway, M. L. Martin-Fernandez, C. Hawes, and J. Runions
PNAS June 25, 2019 116 (26) 12857-12862
A Brief History of Single-Particle Tracking of the Epidermal Growth Factor Receptor
David T. Clarke and Marisa L. Martin-Fernandez
Methods and Protocols DOI: 10.3390/mps2010012
Preparation of polymer gold nanoparticle composites with tunable plasmon coupling and their application as SERS substrates
S. A. A. Belhout, F.R. Baptista, S. J. Devereux, A. W. Parker, A. D. Ward and S. J. Quinn
Nanoscale, 2019, DOI: 10.1039/C9NR05014K
A signal motif retains Arabidopsis ER-α-mannosidase I in the cis-Golgi and prevents enhanced glycoprotein ERAD
Schoberer J, König J, Veit C, Vavra U, Liebminger E, Botchway SW, Altmann F, Kriechbaumer V, Hawes C, Strasser R.
Nat Commun. 2019 Aug 16;10(1):3701. doi: 10.1038/s41467-019-11686-9
Candidalysin activates innate epithelial immune responses via epidermal growth factor receptor
Jemima Ho, Xuexin Yang, Spyridoula-Angeliki Nikou, Nessim Kichik, Andrew Donkin, Nicole O. Ponde, Jonathan P. Richardson, Remi L. Gratacap, Linda S. Archambault, Christian P. Zwirner, Celia Murciano, Rhonda Henley-Smith, Selvam Thavaraj, Christopher J. Tynan, Sarah L. Gaffen, Bernhard Hube, Robert T. Wheeler, David L. Moyes & Julian R. Naglik.
Nat. Commun. 2019 May 24, 10, 2297. doi: 10.1038/s41467-019-09915-2
Manipulation and Deposition of Complex, Functional Block Copolymer Nanostructures Using Optical Tweezers
Gould OEC, Box SJ, Boott CE, Ward AD, Winnik MA, Miles MJ, Manners, I.
ACS NANO Volume: 13 Issue: 4 Pages: 3858-3866 DOI: 10.1021/acsnano.9b00342 APR 2019
Solid immersion microscopy images cells under cryogenic conditions with 12 nm resolution
Lin Wang, Benji Bateman, Laura C. Zanetti-Domingues, Amy N. Moores, Sam Astbury, Christopher Spindloe, Michele C. Darrow, Maria Romano, Sarah R. Needham, Konstantinos Beis, Daniel J. Rolfe, David T. Clarke & Marisa L. Martin-Fernandez
Nature Communications Biology Volume 2, Article number: 74
Structure and Dynamics of the EGF Receptor as Revealed by Experiments and Simulations and Its Relevance to Non-Small Cell Lung Cancer
Marisa L. Martin-Fernandez, David T. Clarke, Selene K. Roberts, Laura C. Zanetti-Domingues and Francesco L. Gervasio
Cells 2019, 8(4), 316; https://doi.org/10.3390/cells8040316
The Rho family GEF FARP2 is activated by aPKCι to control tight junction formation and polarity
Ahmed Elbediwy, Yixiao Zhang, Mathias Cobbaut, Philippe Riou, Ray S. Tan, Selene K. Roberts, Chris Tynan, Roger George, Svend Kjaer, Marisa L. Martin-Fernandez, Barry J. Thompson, Neil Q. McDonald, Peter J. Parker
J Cell Sci 2019 132: jcs223743 doi: 10.1242/jcs.223743
Golgi localization of GnTI requires a polar amino acid residue within its transmembrane domain.
Schoberer J, Liebminger E, Vavra U, Veit C, Grünwald-Gruber C, Altmann F, Botchway SW, Strasser R.
Plant Physiol. 2019 Apr 10. pii: pp.00310.2019. doi: 10.1104/pp.19.00310. [Epub ahead of print]
Ataxia-Telangiectasia Mutated is located in cardiac mitochondria and impacts oxidative phosphorylation.
Blignaut M, Loos B, Botchway SW, Parker AW, Huisamen B.
Sci Rep. 2019 Mar 18;9(1):4782. doi: 10.1038/s41598-019-41108-1.
DNA DSB Repair Dynamics following Irradiation with Laser-Driven Protons at Ultra-High Dose Rates.
Hanton F, Chaudhary P, Doria D, Gwynne D, Maiorino C, Scullion C, Ahmed H, Marshall T, Naughton K, Romagnani L, Kar S, Schettino G, McKenna P, Botchway S, Symes DR, Rajeev PP, Prise KM, Borghesi M.
Sci Rep. 2019 Mar 14;9(1):4471. doi: 10.1038/s41598-019-40339-6.
Direct imaging of the recruitment and phosphorylation of S6K1 in the mTORC1 pathway in living cells.
Ahmed AR, Owens RJ, Stubbs CD, Parker AW, Hitchman R, Yadav RB, Dumoux M, Hawes C, Botchway SW.
Sci Rep. 2019 Mar 4;9(1):3408. doi: 10.1038/s41598-019-39410-z.
Controlling the fluorescence and room-temperature phosphorescence behaviour of carbon nanodots with inorganic crystalline nanocomposites.
Green DC, Holden MA, Levenstein MA, Zhang S, Johnson BRG, Gala de Pablo J, Ward A, Botchway SW, Meldrum FC.
Nat Commun. 2019 Jan 14;10(1):206. doi: 10.1038/s41467-018-08214-6.
2018
The Role of PEG-40-stearate in the Production, Morphology, and Stability of Microbubbles
J. Owen, S. Kamila, S. Shrivastava, D. Carugo, J. Bernardino de la Serna, C. Mannaris, V. Pereno, R. Browning, E. Beguin, A.P. McHale, J.F. Callan, and E. Stride.
Langmuir DOI:10.1021/acs.langmuir.8b02516
A tumor-targeted 4-1BB agonistic trimerbodies induces potent anti-tumor immunity without systemic toxicity
Highlights article: https://acir.org/journal-articles/experimental-immunotherapy/immunotherapy-design?entryId=19980
M Compte, S L Harwood, I Muñoz, R Navarro, M Zonca, G Perez-Chacón, A Erce-Llamazares, N Merino, A Tapia-Galisteo, Á M Cuesta, K Mikkelsen, E Caleireas, N Nuñez-Prado, M A Aznar, S Lykkemark, , J. Marínez-Torrecuadrada, I Melero, F. J. Blanco, J Bernardino de la Serna, J. M. Zapata, L. Sanz, L Alvarez-Vallina.
Nature Communications DOI: 10.1038/s41467-018-07195-w
F. Schneider, D. Waithe, S. Galiani, J. Bernardino de la Serna, E. Sezgin*, C. Eggeling*.
Nano Letters, DOI: 10.1021/acs.nanolett.8b01190
The architecture of EGFR’s basal complexes reveals autoinhibition mechanisms in dimers and oligomers.
Laura C. Zanetti-Domingues, Dimitrios Korovesis, Sarah R. Needham, Christopher J. Tynan, Shiori Sagawa, Selene K. Roberts, Antonija Kuzmanic, Elena Ortiz-Zapater, Purvi Jain, Rob C. Roovers, Alireza Lajevardipour, Paul M.P. van Bergen en Henegouwen, George Santis, Andrew H.A. Clayton, David T. Clarke, Francesco L. Gervasio, Yibing Shan, David E. Shaw, Daniel J. Rolfe, Peter J. Parker, and Marisa L. Martin-Fernandez.
Nat Comms (2018) DOI:10.1038/s41467-018-06632-0.
Cluster Analysis of Endogenous HER2 and HER3 Receptors in SKBR3 Cells
Selene K. Roberts, Michael Hirsch, Alexandra McStea, Laura C. Zanetti-Domingues, David T. Clarke, Jeroen Claus, Peter J. Parker, Lin Wang, Marisa L. Martin-Fernandez
Bio-protocol 10.21769/BioProtoc.3096
Iridium Nanoparticles for Multichannel Luminescence Lifetime Imaging, Mapping Localization in Live Cancer Cells.
King SM, Claire S, Teixeira RI, Dosumu AN, Carrod AJ, Dehghani H, Hannon MJ, Ward AD, Bicknell R, Botchway SW, Hodges NJ, Pikramenou Z.
J Am Chem Soc. 2018 Aug 15;140(32):10242-10249. doi: 10.1021/jacs.8b05105. Epub 2018 Aug 2. PMID: 30032598 [PubMed – in process]
Synthesis, Radiolabelling and In Vitro Imaging of Multifunctional Nanoceramics.
Lledos M, Mirabello V, Sarpaki S, Ge H, Smugowski HJ, Carroll L, Aboagye EO, Aigbirhio FI, Botchway SW, Dilworth JR, Calatayud DG, Plucinski PK, Price GJ, Pascu SI.
ChemNanoMat. 2018 Apr;4(4):361-372. doi: 10.1002/cnma.201700378. Epub 2018 Feb 8. PMID: 29938196 [PubMed] Free PMC Article
High-resolution μCT of a mouse embryo using a compact laser-driven X-ray betatron source.
Cole JM, Symes DR, Lopes NC, Wood JC, Poder K, Alatabi S, Botchway SW, Foster PS, Gratton S, Johnson S, Kamperidis C, Kononenko O, De Lazzari M, Palmer CAJ, Rusby D, Sanderson J, Sandholzer M, Sarri G, Szoke-Kovacs Z, Teboul L, Thompson JM, Warwick JR, Westerberg H, Hill MA, Norris DP, Mangles SPD, Najmudin Z.
ChemNanoMat. 2018 Apr;4(4):361-372. doi: 10.1002/cnma.201700378. Epub 2018 Feb 8. PMID: 29938196 [PubMed] Free PMC Article
Correction to Multimodal Probes: Superresolution and Transmission Electron Microscopy Imaging of Mitochondria, and Oxygen Mapping of Cells, Using Small-Molecule Ir(III) Luminescent Complexes.
Shewring JR, Cankut AJ, McKenzie LK, Crowston BJ, Botchway SW, Weinstein JA, Edwards E, Ward MD.
Sci Rep. 2018 Feb 2;8(1):2310. doi: 10.1038/s41598-018-20840-0. PMID: 29396477 [PubMed – in process] Free PMC Article
Using Optical Tweezers Combined with Total Internal Reflection Microscopy to Study Interactions Between the ER and Golgi in Plant Cells.
Sparkes I, White RR, Coles B, Botchway SW, Ward A.
Methods Mol Biol. 2018;1691:167-178. doi: 10.1007/978-1-4939-7389-7_13.
Super-Resolution Nanoscopy Imaging Applied to DNA Double-Strand Breaks.
D’Abrantes S, Gratton S, Reynolds P, Kriechbaumer V, McKenna J, Barnard S, Clarke DT, Botchway SW.
Radiat Res. 2018 Jan;189(1):19-31. doi: 10.1667/RR14594.1. Epub 2017 Oct 20
Metabolons on the Plant ER.
Kriechbaumer V, Botchway SW.
Methods Mol Biol. 2018;1691:159-166. doi: 10.1007/978-1-4939-7389-7_12.
Determination of the refractive index of insoluble organic extracts from atmospheric aerosol over the visible wavelength range using optical tweezers
Rosalie H. Shepherd, Martin D. King, Amelia A. Marks, Neil Brough, and Andrew D. Ward1
Atmospheric Chemistry and Physics
1064 nm Dispersive Raman Microspectroscopy and Optical Trapping of Pharmaceutical Aerosols
Peter J. Gallimore, Nick M. Davidson, Markus Kalberer, Francis D. Pope, and Andrew D. Ward
Analytical Chemistry
Inhibitor-induced HER2-HER3 heterodimerisation promotes proliferation through a novel dimer interface
Jeroen Claus, Gargi Patel, Flavia Autore, Audrey Colomba, Gregory Weitsman, Tanya N Soliman, Selene Roberts, Laura C Zanetti-Domingues, Michael Hirsch, Francesca Collu, Roger George, Elena Ortiz-Zapater, Paul R Barber, Boris Vojnovic, Yosef Yarden, Marisa L Martin-Fernandez, Angus Cameron, Franca Fraternali, Tony Ng, Peter J Parker
eLIFE doi: 10.7554/eLife.32271
Orchestrated control of filaggrin-actin scaffolds underpins cornification
D Gutowska-Owsiak, J Bernardino de la Serna, M Fritzsche, A Naeem, E Podobas, M Leeming, H Colin-York, R O’Shaughnessy, C Eggeling, and G Ogg
Cell Death and Disease, 9:412
Dissecting single–cell molecular spatiotemporal mobility and clustering at Focal Adhesions in polarised cells by fluorescence fluctuation spectroscopy methods
Esther Garcia, Jorge Bernardino de la Serna
Methods, DOI:10.1016/j.ymeth.2018.03.008
The odd one out: Arabidopsis reticulon 20 does not bend ER membranes but has a role in lipid regulation.
Kriechbaumer V, Maneta-Peyret L, Fouillen L, Botchway SW, Upson J, Hughes L, Richardson J, Kittelmann M, Moreau P, Hawes C.
Sci Rep. 2018 Feb 2;8(1):2310. doi: 10.1038/s41598-018-20840-0.
2017
Affimer proteins are versatile and renewable affinity reagents
Christian Tiede, Robert Bedford, Sophie J Heseltine, Gina Smith, Imeshi Wijetunga, Rebecca Ross, Danah AlQallaf, Ashley PE Roberts, Alexander Balls, Alistair Curd, Ruth E Hughes, Heather Martin, Sarah R Needham, Laura C Zanetti-Domingues, Yashar Sadigh, Thomas P Peacock, Anna A Tang, Naomi Gibson, Hannah Kyle, Geoffrey W Platt, Nicola Ingram, Thomas Taylor, Louise P Coletta, Iain Manfield, Margaret Knowles, Sandra Bell, Filomena Esteves, Azhar Maqbool, Raj K Prasad, Mark Drinkhill, Robin S Bon, Vikesh Patel, Sarah A Goodchild, Marisa Martin-Fernandez, Ray J Owens, Joanne E Nettleship, Michael E Webb, Michael Harrison, Jonathan D Lippiat, Sreenivasan Ponnambalam, Michelle Peckham, Alastair Smith, Paul Ko Ferrigno, Matt Johnson, Michael J McPherson, Darren Charles Tomlinson
eLIFE Jun 27, 2017
Optimized processing and analysis of conventional confocal microscopy generated scanning FCS data
D Waithe, F Schneider, J Chojnacki, MP. Clausen, D Shrestha, J. Bernardino de la Serna, C. Eggeling
Methods, DOI:10.1016/j.ymeth.2017.09.010
Multimodal super-resolution optical microscopy using a transition metal-based probe provides unprecedented capabilities for imaging both nuclear chromatin and mitochondria
S Sreedharan, MR Gill, E Garcia, H K Saeed, D Robinson, A Byrne, A Cadby, T E. Keyes, C Smythe, P Pellett, J Bernardino de la Serna, and J A Thomas
JACS DOI: 10.1021/jacs.7b08772
Lysosomal tracking with a cationic naphthalimide using multiphoton fluorescence lifetime imaging microscopy.
Li M, Ge H, Mirabello V, Arrowsmith RL, Kociok-Köhn G, Botchway SW, Zhu W, Pascu SI, James TD.
2017 Oct 18;53(81):11161-11164. doi: 10.1039/c7cc05166b. Epub 2017 Sep 22.
Oxygen Mapping of Melanoma Spheroids using Small Molecule Platinum Probe and Phosphorescence Lifetime Imaging Microscopy.
Raza A, Colley HE, Baggaley E, Sazanovich IV, Green NH, Weinstein JA, Botchway SW, MacNeil S, Haycock JW.
Sci Rep. 2017 Sep 6;7(1):10743. doi: 10.1038/s41598-017-11153-9.
Stacks off tracks: a role for the golgin AtCASP in plant endoplasmic reticulum-Golgi apparatus tethering
Osterrieder A, Sparkes IA, Botchway SW, Ward A, Ketelaar T, de Ruijter N, Hawes C.
J Exp Bot. 2017 Jun 15;68(13):3339-3350. doi: 10.1093/jxb/erx167.
Cytoskeletal actin dynamics shape a ramifying actin network underpinning immunological synapse formation
M. Fritzsche*, R. Fernandes*, V.T. Chang, H. Colin-York, M.P. Clausen, J.H. Felce, S. Galiani, C. Erlenkämper, M. Santo, J.M. Heddleston, D. Waithe, J. Bernardino de la Serna, B.C. Lagerholm, T.-L. Liu, T.L. Chew, E. Betzig, S.J. Davis, and C. Eggeling
Science Advances 3 (6), e1603032
Spectral Imaging Toolbox
M Aron, R Browning, D Carugo, E Sezgin, J Bernardino de la Serna, C Eggeling, and E Stride
BMC Bioinformatics 18 (1), 254
Fluorescence Lifetime Imaging and Super resolution microscopies shed light into the self-assembly of functional porphyrins on insulating surfaces
B. Mao, DG. Calatayud, V Mirabello, H Ge, BJ. Hodges, RMJ. Jacobs, AM. Shepherd, JA Ribeiro Martins, N Kuganathan, J. Bernardino de la Serna, SW. Botchway, and SI. Pascu
Chemistry – A European Journal. doi: 10.1002/chem.201605232
Electroformation of Giant Unilamellar Vesicles on Stainless Steel Electrodes
V Pereno, D Carugo, L Bau, E Sezgin, J Bernardino de la Serna, C Eggeling, E Stride
ACS Omega 2 (3), pp 994–1002
Glycosylation and Lipids Working in Concert Direct CD2 Ectodomain Orientation and Presentation
A Polley, A Orlowski, R Danne, AA Gurtovenko, J Bernardino de la Serna, C Eggeling, SJ Davis, T Rog, I Vattulainen
J Phys Chem Lett. doi: 10.1021/acs.jpclett.6b02824
Modulation of the molecular arrangement in artificial and biological membranes by phospholipid-shelled microbubbles
D Carugo*, M Aron*, E Sezgin, J Bernardino de la Serna, M Kuimova, C Eggeling, and E Stride
Biomaterials, 113, 105-117
J Bernardino de la Serna, G J. Schütz, C Eggeling, and M Cebecauer
Front. Cell Dev. Biol., DOI: 10.3389/fcell.2016.00106
“Critical importance of fixation conditions in super-resolution imaging of receptor clustering
T Stanly, M Fritzsche, S Banerji, E Garcia, J Bernardino de la Serna, D Jackson, C Eggeling
Biol. Open doi: 10.1242/bio.019943
WIP and WICH/WIRE co-ordinately control invadopodium formation and maturation in human breast cancer cell invasion
E García, C Ragazzini, X Yu, E Cuesta-García, J Bernardino de la Serna, T Zech, D Sarrió, L M Machesky, I M Antón
Scientific Reports. vol 6 23590
Measurement of the EGFR oligomerization organizes kinase-active dimers into competent signalling platforms
Needham, Sarah R.; Roberts, Selene K.; Arkhipov, Anton; et al.
NATURE COMMUNICATIONS, Volume: 7 Article Number: 13307 Published: OCT 31 2016
Measurement of the Raman spectra and hygroscopicity of four pharmaceutical aerosols as they travel from pressurised metered dose inhalers (pMDI) to a model lung
N. Davidson, H.-J. Tong, M. Kalberer, P.C. Seville, d, A.D. Ward, M.K. Kuimova, F.D. Pope
INTERNATIONAL JOURNAL OF PHARMACEUTICS Volume 520, Issues 1–2, 30 March 2017, Pages 59–69(2017)
Dynamic viscosity mapping of the oxidation of squalene aerosol particles
Athanasiadis A, Fitzgerald C, Davidson NM, Giorio C, Botchway SW, Ward AD, Kalberer M, Pope FD, Kuimova MK
Phys Chem Chem Phys. 2016 Oct 26
A C-terminal amphipathic helix is necessary for the in vivo tubule-shaping function of a plant reticulon
Breeze E, Dzimitrowicz N, Kriechbaumer V, Brooks R, Botchway SW, Brady JP, Hawes C, Dixon AM, Schnell JR, Fricker MD, Frigerio L
Proc Natl Acad Sci U S A. 2016 Sep 27;113(39):10902-7. doi: 10.1073/pnas.1605434113
The use of DAPI fluorescence lifetime imaging for investigating chromatin condensation in human chromosomes
Estandarte AK, Botchway S, Lynch C, Yusuf M, Robinson I
Sci Rep. 2016 Aug 16;6:31417. doi: 10.1038/srep31417.
Fluorescence lifetime imaging of optically levitated aerosol: a technique to quantitatively map the viscosity of suspended aerosol particles.
Fitzgerald C, Hosny NA, Tong H, Seville PC, Gallimore PJ, Davidson NM, Athanasiadis A, Botchway SW, Ward AD, Kalberer M, Kuimova MK, Pope FD
Phys Chem Chem Phys. 2016 Aug 21;18(31):21710-9. doi: 10.1039/c6cp03674k
Heteronuclear Ir(III)-Ln(III) Luminescent Complexes: Small-Molecule Probes for Dual Modal Imaging and Oxygen Sensing
Jana A, Crowston BJ, Shewring JR, McKenzie LK, Bryant HE, Botchway SW, Ward AD, Amoroso AJ, Baggaley E, Ward MD
Inorg Chem. 2016 Jun 6;55(11):5623-33. doi: 10.1021/acs.inorgchem.6b00702.
Localization and interactions between Arabidopsis auxin biosynthetic enzymes in the TAA/YUC-dependent pathway.
Kriechbaumer V, Botchway SW, Hawes C
J Exp Bot. 2016 Jul;67(14):4195-207. doi: 10.1093/jxb/erw195.
New Approaches to Photodynamic Therapy from Type I, II and III to Type IV Using One or More Photons
Scherer KM, Bisby RH, Botchway SW, Parker AW.
Anticancer Agents Med Chem. 2016 May 13.
Molybdenum Speciation and its Impact on Catalytic Activity during Methane Dehydroaromatization in Zeolite ZSM-5 as Revealed by Operando X-Ray Methods
Lezcano-González I, Oord R, Rovezzi M, Glatzel P, Botchway SW, Weckhuysen BM, Beale AM.
Angew Chem Int Ed Engl. 2016 Apr
Uniform patchy and hollow rectangular platelet micelles from crystallizable polymer blends
Qiu H, Gao Y, Boott CE, Gould OEC, Harniman RL, Miles MJ, Webb SED, Winnik MA, Manners I
SCIENCE 352(6286):697-701 (2016)
Characterisation of the effects of optical aberrations in single molecule techniques
Benjamin C. Coles, Stephen E. D. Webb, Noah Schwartz, Daniel J. Rolfe, Marisa Martin-Fernandez, and Valentina Lo Schiavo
Biomedical Optics Express Vol. 7, Issue 5, pp. 1755-1767 (2016)
A tale of the epidermal growth factor receptor: The quest for structural resolution on cells
Christopher J. Tynan, Valentina Lo Schiavo, Laura Zanetti-Domingues, Sarah R. Needham, Selene K. Roberts, Michael Hirsch, Daniel J. Rolfe, Dimitrios Korovesis, David T. Clarke and Marisa L. Martin-Fernandez
METHODS Volume: 95 Pages: 86-93
Imaging and radiation effects of gold nanoparticles in tumour cells
McQuaid HN, Muir MF, Taggart LE, McMahon SJ, Coulter JA, Hyland WB, Jain S, Butterworth KT, Schettino G, Prise KM, Hirst DG, Botchway SW, Currell FJ.
NAT. SCI REP. 2016 Jan 20;6:19442. doi: 10.1038/srep19442
Interactions Between an Aryl Thioacetate-Functionalized Zn(II) Porphyrin and Graphene Oxide
Boyan Mao, Dr.; David Gonzalez Calatayud, Dr.; Vincenzo Mirabello, Dr.; Benjamin J Hodges; José Alberto Martins, Dr.; Stanley W. Botchway, Prof.; John M. Mitchels, Dr.; Sofia Ioana Pascu, Dr
(2016) AFM
In Vivo Quantification of Peroxisome Tethering to Chloroplasts in Tobacco Epidermal Cells Using Optical Tweezers
Gao H, Metz J, Teanby NA, Ward AD, Botchway SW, Coles B, Pollard MR, Sparkes I
PLANT PHYSIOL. 2016 Jan;170(1):263-72. doi: 10.1104/pp.15.01529. Epub 2015 Oct 30.
Periodic actin structures in neuronal axons are required to maintain microtubules
Yue Qu, Ines Hahn, Stephen E.D. Webb, Simon P. Pearce, and Andreas Prokop
Molecular Biology of the Cell, Vol. 28, No. 2
Simons M, Pollard MR, Hughes CD, Ward AD, Van Houten B, Towrie M, Botchway SW, Parker AW, Kad NM
SCI REP. 2015 Dec 22;5:18486. doi: 10.1038/srep18486.
Alam IS, Arrowsmith RL, Cortezon-Tamarit F, Twyman F, Kociok-Köhn G, Botchway SW, Dilworth JR, Carroll L, Aboagye EO, Pascu SI
DALTON TRANS. 2015 Dec 14;45(1):144-55. doi: 10.1039/c5dt02537k
Boott CE, Laine RF, Mahou P, Finnegan JR, Leitao EM, Webb SED, Kaminski CF, Manners I
CHEMISTRY – A EUROPEAN JOURNAL 21 (51), 18539-18542 (2015)
Effect of phosphorylation on the EGFR dimer stability probed by single-molecule dynamics and FRET/FLIM
Oana Coban, Laura Zanetti-Dominguez, Daniel R. Matthews, Daniel J. Rolfe, Gregory, Weitsman, Paul R. Barber, Jody Barbeau, Viviane Devauges, Florian Kampmeier, Martyn Winn, Borivoj Vojnovic4, Peter J. Parker, Keith A. Lidke, Diane S Lidke, Simon M. Ameer-Beg, Marisa L. Martin-Fernandez and Tony Ng
BIOPHYS. J. 108 (5), 1013-1026. DOI: 10.1016/j.bpj.2015.01.005
Nanometric molecular separation measurements by single molecule photobleaching
Stephen E D Webb, Michael Hirsch, Sarah R Needham, Benji C Coles, Selene K Roberts, Laura C Zanetti-Domingues, Christopher J Tynan, Marisa L. Martin-Fernandez and Daniel J Rolfe
METHODS (doi: 10.1016/j.ymeth.2015.05.009)
Three-dimensional imaging and uptake of the anticancer drug combretastatin in cell spheroids and photoisomerization in gels with multiphoton excitation
Scherer KM, Bisby RH, Botchway SW, Hadfield JA, Haycock JW, Parker AW.
J BIOMED OPT. 2015 Jul;20(7):78003. doi: 10.1117/1.JBO.20.7.078003.
Reticulomics: Protein-protein interaction studies with two plasmodesmata-localised reticulon family proteins identify binding partners enriched at plasmodesmata, ER and the plasma membrane
Kriechbaumer V, Botchway SW, Slade SE, Knox K, Frigerio L, Oparka KJ, Hawes C
PLANT PHYSIOL. 2015 Sep 9. pii: pp.01153.2015. [Epub ahead of print]
Environmental Pollutant Ozone Causes Damage to Lung Surfactant Protein B (SP-B)
Hemming JM, Hughes BR, Rennie AR, Tomas S, Campbell RA, Hughes AV, Arnold T, Botchway SW, Thompson KC
BIOCHEMISTRY. 2015 Aug 25;54(33):5185-97. doi: 10.1021/acs.biochem.5b00308. Epub 2015 Aug 13.
Laura C. Zanetti-Domingues, Michael Hirsch, Christopher J. Tynan, Daniel J. Rolfe, Teodor Boyadzhiev, Kathrin Scherer, David T. Clarke, Marisa L. Martin-Fernandez, and Sarah R. Needham
PROGRESS IN BIOPHYS & MOL BIOL. (doi:10.1016/j.pbiomolbio.2015.04.002)
Determining the geometry of oligomers of the human epidermal growth factor family on cells with <10 nm resolution
Sarah R. Needham, Laura C. Zanetti-Domingues, David T. Clarke, Michael Hirsch, Marisa L. Martin-Fernandez, Selene K. Roberts, Daniel J. Rolfe, Kathrin Scherer, Christopher J. Tynan
BIOCHEM. SOC. TRANS. (3):309-14. doi: 10.1042/BST20140318.)
Imaging intracellular and systemic in vivo gold nanoparticles to enhance radiotherapy
Botchway SW, Coulter JA, Currell FJ
BR J RADIOL. 2015 Oct;88(1054):20150170. doi: 10.1259/bjr.20150170. Epub 2015 Jun 29
Botchway SW, Scherer KM, Hook S, Stubbs CD, Weston E, Bisby RH, Parker AW
J MICROS. 2015 Feb 9. doi: 10.1111/jmi.12218. [Epub ahead of print]
A fluorescent Arg-Gly-Asp (RGD) peptide-naphthalenediimide (NDI) conjugate for imaging integrin avß3in vitroHu Z, Arrowsmith RL, Tyson JA, Mirabello V, Ge H, Eggleston IM, Botchway SW, Dan Pantos G, Pascu SI
CHEM. COMMUN. (CAMB). 2015 Feb 3. [Epub ahead of print] PMID: 25647279
Confocal and fluorescence lifetime imaging sheds light on the fate of a pyrene-tagged carbon monoxide-releasing Fischer carbene chromium complex
Arrowsmith RL, Atkin AJ, Botchway SW, Fairlamb IJ, Lynam JM, Moir JW, Pascu SI, Ward JS, Zhang WQ
DALTON TRANS. 2015 Jan 2. [Epub ahead of print] PMID: 25553721 publisher
Anticancer phototherapy using activation of E-combretastatins by two-photon-induced isomerization
Scherer KM, Bisby RH, Botchway SW, Hadfield JA, Parker AW
J BIOMED OPT. 2015 May;20(5):051004. doi: 10.1117/1.JBO.20.5.051004
Microfluidic generation of monodisperse ultra-low interfacial tension oil droplets in water
Bolognesi, G., Hargreaves, A., Kirby, A.K., Ward, A., Bain, C.D., Ces, O.,
RSC Adv., 2015,5, 8114-8121, DOI: 10.1039/c4ra14967j
Atmospherically relevant core-shell aerosol studied using optical trapping and Mie scattering
S. H. Jones, M. D. King and A. D. Ward
CHEMICAL COMMUNICATIONS, 2015, 51, 4914 – 4917
2014
Re and (99m)Tc complexes of BodP3–multi-modality imaging probes
Arrowsmith RL, Ge H, Pascu SI, Botchway SW, Clegg W, Harrington RW, Higham LJ
CHEM COMMUN (CAMB). 2014 Dec 21;50(98):15503-5. doi: 10.1039/c4cc06367h. Epub 2014 Sep 24
Schoberer J, Liebminger E, Vavra U, Veit C, Castilho A, Dicker M, Maresch D, Altmann F, Hawes C, Botchway SW, Strasser R
PLANT J. 2014 Dec;80(5):809-22. doi: 10.1111/tpj.12671. Epub 2014 Oct 21
Baggaley E, Cao DK, Sykes D, Botchway SW, Weinstein JA, Ward MD
2014 Jul 14;20(29):8898-903. doi: 10.1002/chem.201403618. Epub 2014 Jun 16. Erratum in: Chemistry. 2014 Dec 22;20(52):17242.
Schoberer J, Botchway SW
METHODS MOL BIOL. 2014;1209:81-95. doi: 10.1007/978-1-4939-1420-3_6
Ditopic boronic acid and imine-based naphthalimide fluorescence sensor for copper(II)
Li M, Ge H, Arrowsmith RL, Mirabello V, Botchway SW, Zhu W, Pascu SI, James TD
Chem Commun (Camb). 2014 Oct 14;50(80):11806-9. doi: 10.1039/c4cc03453h
Schneider, Andreas; Veale, Matthew C.; Bell, Steven J., Botchway SW., et al.
PHYSICA STATUS SOLIDI A-APPLICATIONS AND MATERIALS SCIENCE Volume: 211 Issue: 9 Pages: 2121-2125 Published: SEP 2014
Lawrence K, Xia F, Arrowsmith RL, Ge H, Nelson GW, Foord JS, Felipe-Sotelo M, Evans ND, Mitchels JM, Flower SE, Botchway SW, Wolverson D, Aliev GN, James TD, Pascu SI, Marken F. Langmuir
2014 Oct 7;30(39):11746-52. doi: 10.1021/la404866s. Epub 2014 Mar 21
Baggaley E, Gill MR, Green NH, Turton D, Sazanovich IV, Botchway SW, Smythe C, Haycock JW, Weinstein JA, Thomas JA
ANGEW CHEM INT ED ENGL. 2014 Mar 24;53(13):3367-71. doi: 10.1002/anie.201309427. Epub 2014 Jan 23.
Li M, Boardman DG, Ward A, Huang WE
METHODS MOL. BIOL. 2014;1096: 147-53. doi: 10.1007/978-1-62703-712-9_12
The ErbB4 CYT2 variant protects EGFR from ligand-induced degradation to enhance cancer cell motility
Tai Kiuchi, Elena Ortiz-Zapater James Monypenny, Daniel R. Matthews, Jody Barbeau, Oana Coban, Katherine Lawler, Brian Burford, Daniel Rolfe, Emanuele de Rinaldis, Dimitra Dafou, Michael A. Simpson, Natalie Woodman, Sarah Pinder, Cheryl E. Gillett, Viviane Devauges, Simon P. Poland, Gilbert Fruhwirth, Pierfrancesco Marra, Ykelien L. Boersma Andreas Plückthun, William J Gullick, Yosef Yarden, George Santis, Martyn Winn, Marisa L. Martin-Fernandez, Peter Parker, Andrew Tutt, Simon M. Ameer-Beg, Tony Ng.
Sci. Signal., Vol. 7, Issue 339, p. ra78 DOI: 10.1126/scisignal.2005157
Tang, MJ; Camp, JCJ ; Rkiouak, L; McGregor, J; Watson, IM; Cox, RA; Kalberer, M; Ward, AD; Pope, FD
JOURNAL OF PHYSICAL CHEMISTRY A, 118, 38, 8817-8827, 2014 DOI: 10.1021/jp506753c
Tong, HJ; Fitzgerald, C; Gallimore, PJ; Kalberer, M; Kuimova, MK; Seville, PC; Ward, AD; Pope, FD
CHEMICAL COMMUNICATIONS, 50 (98), 15499-15502, DOI:10.1039/c4cc05803h
Baggaley, Elizabeth; Gill, Martin R.; Green, Nicola H.; Turton, David; Sazanovich, Igor V.; Botchway, Stanley W.; Smythe, Carl; Haycock, John W.; Weinstein, Julia A.; Thomas, Jim A.
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION 53, 3367-3371 (2014)
Needham, Sarah R.; Zanetti-Domingues, Laura C.; Hirsch, Michael; Rolfe, Daniel J.; Tynan, Christopher J.; Roberts, Selene K.; Martin-Fernandez, Marisa L.; Clarke, David T.
BIOCHEMICAL SOCIETY TRANSACTIONS 42, 114-119 (2014)
Baggaley, Elizabeth; Botchway, Stanley W.; Haycock, John W.; Morris, Hayley; Sazanovich, Igor V.; Williams, J. A. Gareth; Weinstein, Julia A.
CHEMICAL SCIENCE 5, 879-886 (2014)
Optical trapping and Raman spectroscopy of solid particles
Rkiouak, L.; Tang, M. J.; Camp, J. C. J.; McGregor, J.; Watson, I. M.; Cox, R. A.; Kalberer, M.; Ward, A. D.; Pope, F. D.
PHYSICAL CHEMISTRY CHEMICAL PHYSICS 16, 11426-11434 (2014)
2013
A ‘Pocket Guide’ to Total Internal Reflection Fluorescence
Martin-Fernandez, ML; Tynan, CJ, Webb, SED
JOURNAL OF MICROSCOPY 252: 16-22 (2013)
Microcrystal manipulation with laser tweezers
Wagner, Armin; Duman, Ramona; Stevens, Bob; Ward, Andy
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY 69, 1297-1302 (2013)
Reynolds, Pamela; Botchway, Stanley W.; Parker, Anthony W.; O’Neill, Peter
MUTATION RESEARCH-GENETIC TOXICOLOGY AND ENVIRONMENTAL MUTAGENESIS756, 14-20 (2013)
Laser heating of sulfuric acid droplets held in air by laser Raman tweezers
Hunt, Oliver R.; Ward, Andrew D.; King, Martin D.
RSC ADVANCES 3, 19448-19454 (2013)
Jones, Stephanie H.; King, Martin D.; Ward, Andrew D.
PHYSICAL CHEMISTRY CHEMICAL PHYSICS 15 20735-20741 (2013)
Second-harmonic scattering in aqueous urea solutions: evidence for solute clusters?
Ward, Martin R.; Botchway, Stanley W.; Ward, Andrew D.; Alexander, Andrew J.
FARADAY DISCUSSIONS 167, 441-454 (2013)
Schoberer, Jennifer; Liebminger, Eva; Botchway, Stanley W.; Strasser, Richard; Hawes, Chris
PLANT PHYSIOLOGY 161, 1737-1754 (2013)
Thompson, Katherine C.; Jones, Stephanie H.; Rennie, Adrian R.; King, Martin D.; Ward, Andrew D.; Hughes, Brian R.; Lucas, Claire O. M.; Campbell, Richard A.; Hughes, Arwel V
LANGMUIR 29, 4594-4602 (2013)
Zanetti-Domingues, LC; Tynan, CJ; Rolfe, DJ; Clarke, DT; Martin-Fernandez, ML
PLoS ONE 8 (9): e74200 (2013)
Needham, SR; Hirsch, M; Rolfe, DJ; Clarke, DT; Zanetti-Domingues, LC; Wareham, R; Martin-Fernandez, ML
PLoS ONE 8 (5): e62331 (2013)
A Stochastic Model for Electron Multiplication Charge-Coupled Devices – From Theory to Practice
Hirsch, M; Wareham, RJ; Martin-Fernandez, ML; Hobson, MP; Rolfe, DJ
PLoS ONE 8 (1): e53671 (2013)
2012
Zanetti-Domingues, LC; Martin-Fernandez, ML; Needham, SR; Rolfe, DJ; Clarke, DT
PLoS ONE 7 (9): e45655 (2012)
Martin-Fernandez, ML; Clarke, DT
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES 13 (11): 14742-14765 (2012)
Cell wall constrains lateral diffusion of plant plasma-membrane proteins
A. Martinière, I. Lavagi, G. Nageswaran, D.J. Rolfe, L. Maneta-Peyret, Doan-Trung Luu, S.W. Botchway, S.E.D. Webb, S. Mongrand, C. Maurel, M.L. Martin-Fernandez, J. Kleine-Vehn, J. Friml, P. Moreau, J. Runions
PNAS (2012)
Multicolor single molecule imaging in cells with near infra-red dyes
Tynan, CJ; Clarke, DT; Coles, BC; Martin-Fernandez, ML; Webb, SED
PLoS ONE 7 (4): e36265 (2012)
Investigating the conformation of HER membrane proteins in cells via single molecule and FLIM microscopy
Martin-Fernandez, ML; Clarke, DT; Hirsch, M; Needham, SR; Roberts, SK; Rolfe, DJ; Tynan, CJ; Webb, SED; Winn, M; Zanetti-Domingues, L
MOLECULAR IMAGING ISBN 978-953-51-0359-2 (2012)
Multicolour single molecule imaging on cells using a supercontinuum source
Webb, SED; Rolfe, DJ; Coles, BC; Wareham, R; Martin-Fernandez, ML
BIOMEDICAL OPTICS EXPRESS 3 (3): 400-406 (2012)
Laser-induced radiation microbeam technology and simultaneous real-time fluorescence imaging in live cells
Botchway, SW; Reynolds, P; Parker, AW; O’Neill, P
METHODS IN ENZYMOLOGY 504: 3-28 (2012)
Direct interaction of baculovirus capsid proteins VP39 and EXON0 with kinesin-1 in insect cells determined by fluorescence resonance energy transfer-fluorescence lifetime imaging microscopy
Danquah, JO; Botchway, S; Jeshtadi, A; King, LA
JOURNAL OF VIROLOGY 86 (2): 844-853 (2012)
Incandescent porous carbon microspheres to light up cells: solution phenomena and cellular uptake
Duffy, P; Magno, LM; Yadav, RB; Roberts, SK; Ward, AD; Botchway, SW; Colavita, PE; Quinn, SJ
JOURNAL OF MATERIALS CHEMISTRY 22 (2): 432-439 (2012)
Human epidermal growth factor receptor (HER1) aligned on the plasma membrane adopts key features of Drosophila EGFR asymmetry
Martin-Fernandez, ML
BIOCHEMICAL SOCIETY TRANSACTIONS 40, 184-188 (2012)
Investigating extracellular in situ EGFR structure and conformational changes using FRET microscopy
Roberts, SK; Tynan, CJ; Winn, M; Martin-Fernandez, ML
BIOCHEMICAL SOCIETY TRANSACTIONS 40 (1), 189-194 (2012)
Two-photon excitation with pico-second fluorescence lifetime imaging to detect nuclear association of flavanols
Mueller-Harvey, I; Feucht, W; Polster, J; Trnkova, L; Burgos, P; Parker, AW; Botchway, SW
ANALYTICA CHIMICA ACTA 719: 68-75 (2012).
2011
Subcellular and single-molecule imaging of plant fluorescent proteins using total internal reflection fluorescence microscopy (TIRFM)
Vizcay-Barrena, G; Webb, SED; Martin-Fernandez, ML; Wilson, ZA
JOURNAL OF EXPERIMENTAL BOTANY 62 (15): 5419-5428 (2011)
Human epidermal growth factor receptor (EGFR) aligned on the plasma membrane adopts key features of Drosophila EGFR asymmetry
Tynan, CJ; Roberts, SK; Rolfe, DJ; Clarke, DT; Loeffler, HH; Kaestner, J; Winn, MD; Parker, PJ; Martin-Fernandez, ML
MOLECULAR AND CELL BIOLOGY 31 (11): 2241-2252 (2011)
CAR modulates E-cadherin dynamics in the presence of adenovirus type 5
Hussain, F; Morton, PE; Snippe, M; Sullivan, J; Farmer, C; Martin-Fernandez, ML; Parsons, M; Santis, G
PLOS ONE 6 (8): 10.1371 (2011)
Circular dichroism and its use in protein-folding studies
Clarke, DT
METHODS IN MOLECULAR BIOLOGY 752: 59-72 (2011)
Development of fluorophore dynamics imaging as a probe for lipid domains in model vesicles and cell membranes
Botchway, SW; Lewis, AM; Stubbs, CD
EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS 40(2): 131-141 (2011)
Automated multidimensional single molecule fluorescence microscopy feature detection and tracking
Rolfe, DJ; McLachlan, CI; Hirsch, M; Needham, SR; Tynan, CJ; Webb, SED; Martin-Fernandez, ML; Hobson, MP
EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS 40 (10): 1167-1186 (2011)
Optics clustered to output unique solutions: A multi-laser facility for combined single molecule and ensemble microscopy
Clarke, DT; Botchway, SW; Coles, BC; Needham, SR; Roberts, SK; Rolfe, DJ; Tynan, CJ; Ward, AD; Webb, SED; Yadav, R; Zanetti-Domingues, L; Martin-Fernandez, ML
REVIEW OF SCIENTIFIC INSTRUMENTS 82 (9): 93705 (2011)